Targeted metabolomics reveals plasma short-chain fatty acids are associated with metabolic dysfunction-associated steatotic liver disease

Background Alterations in the production of short-chain fatty acids (SCFAs) may reflect disturbances in the gut microbiota and have been linked to metabolic dysfunction-associated steatotic liver disease (MASLD). We assessed plasma SCFAs in patients with MASLD and healthy controls. Methods Fasting venous blood samples were collected and eight SCFAs were measured using gas chromatography-tandem mass spectrometry (GC-MS/MS). Relative between-group differences in circulating SCFA concentrations were estimated by linear regression, and the relation between SCFA concentrations, MASLD, and fibrosis severity was investigated using logistic regression. Results The study includes 100 patients with MASLD (51% with mild/no fibrosis and 49% with significant fibrosis) and 50 healthy controls. Compared with healthy controls, MASLD patients had higher plasma concentrations of propionate (21.8%, 95% CI 3.33 to 43.6, p = 0.02), formate (21.9%, 95% CI 6.99 to 38.9, p = 0.003), valerate (35.7%, 95% CI 4.53 to 76.2, p = 0.02), and α-methylbutyrate (16.2%, 95% CI 3.66 to 30.3, p = 0.01) but lower plasma acetate concentrations (− 30.0%, 95% CI − 40.4 to − 17.9, p < 0.001). Among patients with MASLD, significant fibrosis was positively associated with propionate (p = 0.02), butyrate (p = 0.03), valerate (p = 0.03), and α-methylbutyrate (p = 0.02). Six of eight SCFAs were significantly increased in F4 fibrosis. Conclusions In the present study, SCFAs were associated with MASLD and fibrosis severity, but further research is needed to elucidate the potential mechanisms underlying our observations and to assess the possible benefit of therapies modulating gut microbiota. Supplementary Information The online version contains supplementary material available at 10.1186/s12876-024-03129-7.


Background
Metabolic dysfunction-associated steatotic liver disease (MASLD) and its progression to steatohepatitis and cirrhosis has previously been linked to the gut microbiome through various mechanisms.This association may reflect gut dysbiosis and systemic effects of gut microbiota-derived metabolites, including short-chain fatty acids (SCFAs) [1].SCFAs are bioactive metabolites produced by bacterial fermentation of non-digestible carbohydrates and proteins in the colon [2].SCFAs are important for gut barrier integrity and immune function, especially butyrate, which is also the primary energy source for gut epithelial cells [2][3][4].In general, SCFAs play important roles in immune responses, including regulation of both the innate and adaptive immune system [5].The mechanisms linking SCFAs and MASLD may involve alterations in glucose homeostasis, lipid metabolism, and inflammatory and immune responses [2,6].
SCFAs are utilized in the colon, excreted in stool, or absorbed into the bloodstream via the portal vein [7,8].Beyond the gut, systemic effects of circulating SCFAs are an increasingly active area of research.Though only a small amount of gut-derived SCFAs are found to be systemically available, a significant uptake of portal propionate and butyrate by the liver has previously been found [7,8].In hepatic cells, propionate can be used for gluconeogenesis and acetate for de novo lipogenesis [2,7,9].Previous studies found that fecal SCFA levels were increased in individuals with obesity and MASLD [6,10,11].However, the evidence linking circulating concentrations of SCFAs to MASLD and other metabolic diseases remains unclear [12][13][14][15][16].Some studies found no clear differences between controls and patients with MASLD.Other studies found lower SCFAs levels in MASLD cirrhosis or conversely observed higher levels in patients with hepatocellular carcinoma and cirrhosis related to MASLD [13,[16][17][18].The evidence is therefore conflicting.The discrepancies may reflect differences in study design, such as the procedures used for selecting controls and MASLD patients, as well as the severity of the underlying MASLD.We therefore chose to investigate the association between plasma SCFAs and MASLD presenting the full range of the disease with healthy volunteers as control group.The included patients ranged from no fibrosis (F0)/mild fibrosis (F1) to severe fibrosis (F4) corresponding to cirrhosis.Accordingly, our study provides important new information about the role of SCFA in MASLD based on an evaluation of the disease at different stages of progression.

Study design and participants
Patients and healthy controls were included in a prospective cohort study evaluating clinical predictors and biomarkers in MASLD.The primary objectives in this study were to explore associations between plasma concentrations of individual SCFAs and the odds of having MASLD.For participants with MASLD, we evaluated the link between SCFAs and the probability of having significant fibrosis defined as F2-F4.Secondary outcomes were to estimate relative group differences in SCFA levels between MASLD patients and healthy controls, and to explore associations between SCFA concentrations and the odds of having severe steatosis, lobular inflammation, or ballooning, as well as individual fibrosis stages F0-F4.
We included 100 patients with clinically and biopsyproven MASLD and fibrosis stage F0-F4 recruited from the outpatient clinic at the Gastro Unit Copenhagen University Hospital Hvidovre, Denmark, as well as 50 healthy volunteers recruited via advertisement.Patients and controls were matched to balance the distributions of age and sex across groups.The study was approved by The Regional Committee on Health Research Ethics (H-17,029,039) and performed in accordance with the Declaration of Helsinki [19].Informed consent was obtained from all participants.The study was observational, and no specific dietary restrictions were used.All participants had a low alcohol intake (< 7 units/week for females and < 14 units/week for males) and none had viral hepatitis, autoimmune liver diseases, drug-induced liver disease, or other liver diseases.Patients with MASLD underwent a clinical, biochemical, and histological assessment.The histological diagnosis was made by two experienced pathologists based on the features: steatosis (0-3), lobular inflammation (0-2), hepatocellular ballooning (0-2), and fibrosis (0-4), as previously described [20].Healthy controls had a normal Fibroscan® with a median < 7 kpa, a controlled attenuation parameter (CAP) value of < 255 dB/m, and normal values in all blood tests.

Analyses of SCFAs
Venous blood samples were collected in EDTA tubes after at least four hours of fasting, immediately put on ice, and centrifuged within two hours of collection.Plasma was stored at − 80 0 C until analyses.The samples were analysed at Bevital AS, Bergen, Norway in 96-well plates with each plate including a fixed number of calibration and quality control samples.Using an isotopelabeled gas chromatography-tandem mass spectrometry (GC-MS/MS) platform with automated sample workup, we determined eight SCFAs (acetate, propionate, butyrate, formate, valerate, α-methylbutyrate, isovalerate, and isobutyrate) in plasma (https://bevital.no).Within-and between-day coefficient of variances for the eight SCFAs ranged from 3.3 to 9.3% and 2.3-5.9%,respectively.Additional information about quality control can be found at https://bevital.no/logistics/ and in supplementary information.

Statistical analyses
Data are presented as n (%) or means ± standard deviations (SDs).All inferential tests are two-tailed with a nominal alpha level of 0.05.Adjustments for multiplicity were not performed due to the exploratory nature of the analyses.All statistical analyses were conducted with R v4.2.0 (https://www.r-project.org), and plots were made using the ggplot2 v3.4.2 and ggforrestplot v0.1.0packages.
In linear regression models of MASLD patients and healthy controls, we transformed SCFA concentrations by the natural logarithm and presented relative betweengroup differences as percentages calculated from the regression coefficients.In the figures, we show results in relative terms as sympercents (symmetric percent, s%), which are additive and symmetric percentage differences on the 100 log e scale [21].We log-transformed the SCFA concentrations by log2 in the logistic regression to show odds ratios with a doubling in SCFAs levels.
The associations between SCFA concentrations and MASLD (versus healthy controls) and histological MASLD severity (no/mild fibrosis versus significant fibrosis) were analysed with unmatched binomial logistic regression in age and sex adjusted analyses, as well as with adjustments for age, sex, and BMI.In the primary analysis, we used the glm function in the stats package v4.2.0 for the binominal coded outcome groups.To reduce possible bias introduced by small sample sizes, we repeated the analyses using penalized maximum likelihood logistic regression (Firth's method) using the logistf function in the logistf package v1.24.1.The analyses largely confirmed our initial results and are reported in supplementary Tables 1 and 2.
Cross-sectional analyses of relative differences in SCFA concentrations between groups and fibrosis stages were performed by linear regression modeling using the lm function from the stats package v4.2.0 in models adjusted for (i) age and sex or (ii) age, sex, and BMI.
Left-censored missing values of SCFA concentrations due to lower than the limit of detection or quantification, were considered as missing rather than random, and imputed by the GSimp method, an approach previously utilized in metabolomics studies (see Supplementary method for further details) [22].

Discussion
We found that the odds of having MASLD was associated with lower plasma concentrations of acetate and higher concentrations of propionate, formate, valerate, and α-methylbutyrate.The concentration of acetate was not associated with the histological severity of MASLD based on fibrosis severity (comparing severe fibrosis versus no/ mild fibrosis), but we found that significant fibrosis was associated with increased propionate, butyrate, valerate, and α-methylbutyrate concentrations.
Acetate and formate had the highest plasma concentrations in our study, with plasma concentrations more than ten times higher than the third most abundant SCFA, propionate.The high levels of formate arise from both endogenous production and production from the gut microbes [23].Acetate, propionate, and butyrate are the most abundant SCFAs in the gut, produced from saccharolytic fermentation of dietary fibers, in contrast to the less abundant SCFAs from proteolytic fermentation.In general, saccharolytic SCFAs are thought to have beneficial systemic effects on glucose and lipid metabolism, as well as on the regulation of satiety and inflammation, whereas proteolytic SCFAs are less well studied but often thought to have harmful systemic effects [24].
In our study, both acetate and propionate were associated with MASLD.While the exact role of these SCFAs in MASLD is unknown, indirect evidence may be derived via studies evaluating other metabolic diseases.Acetate has previously been linked with gut microbiota diversity, lower visceral fat, and milder cases of MASLD [25,26].In agreement with these previous findings, patients with MASLD had a lower acetate concentration compared with healthy controls in our study.Propionate is also positively associated with health in adequate concentrations and has been linked with the release of gut hormones affecting energy intake and satiety [27].However, studies indicating negative effects also exist.In a study of patients with early MASLD, increased abundance of SCFAs-producing bacteria and fecal acetate and propionate levels were associated with a higher TH17/rTreg ratio, suggesting that SFCAs could contribute to low-grade inflammation [6].Increased fecal propionate has been associated with increased risk of type 2 diabetes [28], and supplementation with propionate has been found to increase plasma levels of glucagon and insulin, increasing the risk of insulin resistance and weight gain [14,15].In agreement with these findings, our study found higher plasma concentrations of propionate in patients with MASLD, Adjusted OR with (95% CI) and p values from logistic regression analysis evaluating SCFAs in patients with MASLD grouped according to histological severity.The analyses evaluate fibrosis (significant, F2-F4), steatosis (severe, S2/3) and the presence of lobular inflammation and ballooning.Analyses are adjusted for age and sex.SCFAs Short chain fatty acids who also had higher HbA1c, BMI, and prevalence of diabetes.
MASLD is characterized by specific histological changes in the liver, including steatosis, inflammation, ballooning, and fibrosis.We evaluated the plasma SCFAs in relation to histological features in patients with MASLD evenly distributed across the five fibrosis categories, representing the entire spectrum from simple steatosis to metabolic dysfunction-associated steatohepatitis and cirrhosis.In a previous study investigating the gut microbiome in MASLD patients, host enzymes associated with propionate and butyrate metabolism were more abundant in advanced fibrosis than in mild/ moderate fibrosis [26].In the present study, we found higher concentrations of both propionate and butyrate in patients with significant fibrosis compared to patients with MASLD and no/mild fibrosis.Behary et al. found increased serum levels of both propionate and butyrate in patients with MASLD-cirrhosis and hepatocellular carcinoma and ex vivo studies, suggesting potential immune-modulatory effects [17].However, Xiong et al. found that plasma concentrations of propionate and   butyrate were decreased in MASLD-cirrhosis compared with patients classified as having MASLD without fibrosis based on clinical assessments [13].The contrasting findings may be due to the small sample sizes and heterogeneity of the studied population, underscoring the need for larger, clinical studies including a broad spectrum of MASLD patients.
Previous studies investigating circulating SCFAs in relation to MASLD present inconsistent findings which may reflect a lack of standardization and differences in the study design [13,[16][17][18].The selection of both patients and controls makes it difficult to compare results across studies.For instance, two studies included patients with MASLD cirrhosis diagnosed clinically or histologically, and one study included controls with increased BMI as well as other metabolic diseases [13,17]., while another study only included participants with MASLD without fibrosis and controls undergoing gastric bypass surgery [16].
In a study including participants with steatotic liver disease and type 2 diabetes, Tsai et al. found that those with the greatest degree of steatosis (assessed by ultrasound) tended to have similar circulating concentrations of most SCFAs as those with "no/mild steatosis", however, isobutyrate, and methylbutyrate levels were lower in participants with "moderate/severe steatosis" [18].We found a negative association between severe histological steatosis (S2-3) and propionate, α-methylbutyrate, and isobutyrate.Our observations may reflect alterations in lipid metabolism, potentially linked to gut dysbiosis and the gut-liver axis.However, a study including participants undergoing bariatric surgery found no differences in circulating SCFA concentrations between participants with normal liver tissue, simple steatosis, or MASLD without fibrosis [16].
The concentrations of propionate and butyrate but not acetate may be higher in the portal vein compared to the hepatic vein, indicating uptake of these SCFAs in the liver [8].We found higher SCFA concentrations in patients with MASLD-cirrhosis, which may reflect portosystemic shunts or the impaired function of the cirrhotic liver decreasing SCFA uptake and metabolism by the liver.Clausen et al. found higher SCFA concentrations in patients with hepatic coma compared to both patients with cirrhosis and healthy controls.In contrast, Bloemen et al. found preserved butyrate and propionate liver uptake in 12 cirrhotic patients, and Juanola et al. found an inverse relationship between circulating SCFAs and hepatic venous-pressure gradient (HVPG) measure in cirrhotic patients, though only reaching significance for butyrate [29][30][31].In these studies, the etiology of cirrhosis was primarily alcohol, which could also affect SCFA concentrations through reduced intake of dietary fiber, and the health and diversity of the patients gut microbiome may differ from that found in MASLD.
In our study, blood samples were collected after a four hour fasting period.The duration of fasting could potentially influence the concentration of SCFAs in the blood as this will affect the metabolic processes in the body.Fasting can also lead to alterations in the gut microbiota and their production of SCFAs the availability of substrates for bacterial fermentation in the gut.Therefore, fasting can impact SCFA concentrations in the blood.The duration of fasting, dietary differences, use of probiotics, and medication could potentially affect our results including differences between patients with MASLD and controls [32][33][34].There is no clear evidence showing the effect of diet or medication on SCFAs but a systematic review found no clear effect of supplementary dietary fibers on SCFA levels [34].In addition, a review evaluating the effects of fasting found a possible benefit of fasting on gut microbiota but that additional human models are needed [32].It is possible that dietary modifications can change the composition as well as the diversity of the microbiota and subsequently the progression of MASLD.Additional studies are needed to identify the diets that could lead to clinically significant beneficial changes and the clinical value of these.Likewise, different medications are likely to be important in the assessment of gut microbiota.For example, although the exact mechanisms are not yet fully elucidated, the use of statins might alter the lipid profile and systemic inflammation and eventually influence the gut environment and microbiota.Proton pump inhibitors could also impact the balance of bacteria in the upper gastrointestinal tract due to their effect on reduced acidity in the stomach.The use of laxatives, antibiotics, probiotics and other medications are also likely to influence microbiota.Due to the observational nature, we were unable to control for these potential confounders.The included patients received several different medications and detailed evaluations into the impact of each drug are not possible.However, future studies evaluating possible detrimental as well as beneficial effects would provide important information.One possibly beneficial medication is prebiotics as well as probiotics.Both could potentially modulate the composition and diversity of the gut microbiota and/or restore a healthier balance of gut microbes.However, more research is needed to better understand the specific strains, dosages, and mechanisms by which both exert their effects in MASLD.

Conclusions
In the present study, lower plasma concentrations of acetate were associated with having MASLD, whereas higher concentrations of propionate, valerate, and α-methylbutyrate were associated with both MASLD and significant fibrosis.Our findings could indicate a role for SCFAs in MASLD and disease progression.However, previous results are somewhat contradicting, and differences in patients and study design make it difficult to compare across studies.To gain more knowledge on the potential role of SCFAs in MASLD and cirrhosis, validation studies, greater standardization, and larger clinical studies including a broad spectrum of MASLD patients are needed.

Table 1
Characteristics of patients with MASLD and healthy controls Data presented as n (%) or mean values with standard deviations.MASLD, Metabolic dysfunction-associated steatotic liver disease; BMI, Body mass index; ALT, Alanine aminotransferase; LDL-C, Low-density lipoprotein cholesterol; VLDL-C, Very-low-density lipoprotein cholesterol; HDL-C, High-density lipoprotein cholesterol; CAP, Continuous attenuation factor

Table 2
Concentration of plasma SCFAs in healthy controls and patients with MASLD

Table 3
Logistic regression analysis evaluating SCFAs in patients with MASLD grouped according to histological severity